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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83937.1ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dac:Daci_0261 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (324 aa)    
Predicted Functional Partners:
AEB83936.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dac:Daci_0260 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
0.995
AEB83938.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dac:Daci_0262 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
  
 0.977
AEB83939.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dac:Daci_0263 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
  
 0.970
AEB83940.1
PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0264 extracellular ligand-binding receptor.
 
  
 0.944
AEB83688.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2607 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.923
AEB86018.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2712 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.922
AEB82734.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: bav:BAV0982 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.906
AEB82736.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pth:PTH_2348 ABC-type branched-chain amino acid transport systems, ATPase component; SMART: ATPase, AAA+ type, core.
  
 0.892
AEB83686.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: xtr:100485612 putative ribose/galactose/methyl galactoside import ATP-binding protein-like; SMART: ATPase, AAA+ type, core.
  
 0.888
AEB83921.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: jan:Jann_2265 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 0.884
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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