Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB83945.1PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: ctt:CtCNB1_0646 histone-like nucleoid-structuring protein H-NS. (90 aa)    
Predicted Functional Partners:
AEB87006.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.749
AEB85475.1
PFAM: Protein of unknown function DUF3619; KEGG: dia:Dtpsy_1955 putative transmembrane protein.
  
     0.748
AEB86010.1
KEGG: dia:Dtpsy_2705 hypothetical protein.
  
     0.698
AEB85898.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_2452 porin gram-negative type.
  
    0.608
AEB82611.1
KEGG: dac:Daci_0175 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
  
     0.596
AEB85966.1
KEGG: ajs:Ajs_3321 hypothetical protein.
  
     0.590
AEB83180.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type.
  
    0.589
AEB85476.1
PFAM: Protein of unknown function DUF3106; KEGG: ajs:Ajs_1766 putative transmembrane protein.
  
     0.561
AEB83944.1
KEGG: reh:H16_A2948 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
     
 0.556
AEB86916.1
PFAM: Branched-chain amino acid transport, AzlD; KEGG: dia:Dtpsy_3400 branched-chain amino acid transport.
  
     0.556
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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