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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83967.1KEGG: pap:PSPA7_3722 putative lipoprotein. (92 aa)    
Predicted Functional Partners:
AEB83968.1
KEGG: bpt:Bpet2202 LysR family transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; Belongs to the LysR transcriptional regulatory family.
       0.773
AEB83969.1
PFAM: Monooxygenase, FAD-binding; KEGG: ami:Amir_4339 monooxygenase FAD-binding.
       0.524
AEB83970.1
KEGG: bbr:BB2379 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
       0.521
AEB83971.1
PFAM: ABC-2 type transporter; KEGG: abc:ACICU_01702 ABC-type multidrug transport system, permease component.
       0.511
AEB83972.1
PFAM: ABC-2 type transporter; KEGG: bpa:BPP1316 hypothetical protein.
       0.511
AEB83973.1
PFAM: ABC transporter-like; KEGG: pag:PLES_25911 ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.511
AEB83974.1
PFAM: Secretion protein HlyD; KEGG: bbr:BB2383 HlyD family secretion protein.
       0.511
AEB83963.1
PFAM: Conjugal transfer,TrbC; KEGG: rme:Rmet_1551 conjugal transfer protein TrbC.
       0.497
AEB83965.1
PFAM: CopG-like DNA-binding; KEGG: dac:Daci_0439 CopG/DNA-binding domain-containing protein.
       0.497
AEB83962.1
KEGG: pap:PSPA7_3704 conjugal transfer protein.
       0.494
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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