STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83969.1PFAM: Monooxygenase, FAD-binding; KEGG: ami:Amir_4339 monooxygenase FAD-binding. (417 aa)    
Predicted Functional Partners:
AEB86961.1
PFAM: Flavoprotein transmembrane component; FAD-binding 8; KEGG: dia:Dtpsy_3433 ferric reductase domain protein transmembrane component.
   
    0.812
AEB82644.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: ajs:Ajs_0155 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
    0.807
AEB83973.1
PFAM: ABC transporter-like; KEGG: pag:PLES_25911 ATP-binding protein; SMART: ATPase, AAA+ type, core.
   
 
 0.777
AEB83970.1
KEGG: bbr:BB2379 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
       0.768
AEB83974.1
PFAM: Secretion protein HlyD; KEGG: bbr:BB2383 HlyD family secretion protein.
     
 0.761
AEB83971.1
PFAM: ABC-2 type transporter; KEGG: abc:ACICU_01702 ABC-type multidrug transport system, permease component.
       0.751
AEB83972.1
PFAM: ABC-2 type transporter; KEGG: bpa:BPP1316 hypothetical protein.
       0.751
AEB83629.1
KEGG: ajs:Ajs_3311 hypothetical protein.
   
    0.733
AEB82643.1
PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_0172 extracellular ligand-binding receptor.
   
  
 0.728
AEB86468.1
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_0291 extracellular ligand-binding receptor.
   
  
 0.728
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.