close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83978.1Hypothetical protein; Manually curated; KEGG: sml:Smlt1309 hypothetical protein. (151 aa)    
Predicted Functional Partners:
AEB83977.1
KEGG: pap:PSPA7_3726 hypothetical protein.
       0.781
AEB83980.1
KEGG: rme:Rmet_1257 hypothetical protein.
       0.781
AEB83982.1
KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase; manually curated; PFAM: Cobyrinic acid a,c-diamide synthase.
     
 0.778
AEB83979.1
PFAM: Peptidase S26, conserved region; KEGG: rme:Rmet_1258 TraF peptidase.
       0.773
AEB83981.1
KEGG: bpt:Bpet2187 hypothetical protein.
       0.773
AEB83983.1
PFAM: Replication initiator protein A; KEGG: dia:Dtpsy_3526 putative replication initiator and transcription repressor protein.
       0.423
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.