STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84031.1KEGG: pol:Bpro_1263 hypothetical protein. (201 aa)    
Predicted Functional Partners:
AEB84032.1
Electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; KEGG: net:Neut_1585 hypothetical protein.
 
   
 0.961
AEB84033.1
PFAM: Cytochrome c, class I; KEGG: net:Neut_1584 cytochrome c, class I.
 
     0.857
AEB84035.1
KEGG: net:Neut_1582 cytochrome c oxidase, subunit I; PFAM: Cytochrome c oxidase, subunit I.
 
     0.821
AEB84034.1
PFAM: Cytochrome c oxidase, monohaem subunit/FixO; KEGG: net:Neut_1583 cytochrome c oxidase, mono-heme subunit/FixO.
 
     0.803
AEB83108.1
TIGRFAM: Conserved hypothetical protein CHP03016, PEP-CTERM; KEGG: rfr:Rfer_0661 hypothetical protein.
  
     0.701
AEB85571.1
KEGG: ajs:Ajs_2034 hypothetical protein.
  
     0.667
AEB85513.1
KEGG: ajs:Ajs_1730 hypothetical protein.
  
     0.643
AEB83495.1
KEGG: rfr:Rfer_0701 hypothetical protein.
  
     0.632
AEB86787.1
Lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; KEGG: ajs:Ajs_3937 lipase.
  
     0.555
AEB82859.1
Glycosyltransferase; KEGG: dia:Dtpsy_0402 glycosyltransferase.
  
     0.541
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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