Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84032.1Electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; KEGG: net:Neut_1585 hypothetical protein. (211 aa)    
Predicted Functional Partners:
AEB84031.1
KEGG: pol:Bpro_1263 hypothetical protein.
 
   
 0.961
AEB84033.1
PFAM: Cytochrome c, class I; KEGG: net:Neut_1584 cytochrome c, class I.
 
  
 0.883
AEB84035.1
KEGG: net:Neut_1582 cytochrome c oxidase, subunit I; PFAM: Cytochrome c oxidase, subunit I.
 
   
 0.850
AEB84034.1
PFAM: Cytochrome c oxidase, monohaem subunit/FixO; KEGG: net:Neut_1583 cytochrome c oxidase, mono-heme subunit/FixO.
 
   
 0.825
AEB86273.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.729
AEB86276.1
PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dia:Dtpsy_2857 cytochrome c oxidase assembly protein.
  
 0.707
AEB86230.1
PFAM: Cytochrome c oxidase subunit II C-terminal; KEGG: app:CAP2UW1_1791 cytochrome c oxidase subunit II.
 
 0.704
AEB86282.1
Cytochrome oxidase assembly; PFAM: Heme A synthase/Protoheme IX farnesyltransferase; KEGG: ajs:Ajs_3528 cytochrome oxidase assembly.
  
 0.703
AEB86232.1
Cytochrome oxidase assembly; PFAM: Heme A synthase/Protoheme IX farnesyltransferase; KEGG: avn:Avin_00950 cytochrome oxidase assembly protein.
  
 0.667
AEB84617.1
KEGG: ajs:Ajs_2775 ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome o ubiquinol oxidase subunit II; PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal.
  
 0.657
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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