Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84059.1PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_0182 extracellular ligand-binding receptor. (404 aa)    
Predicted Functional Partners:
AEB85908.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2463 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.857
AEB85909.1
ABC-type transporter, integral membrane subunit; KEGG: dia:Dtpsy_2464 inner-membrane translocator; manually curated; PFAM: ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.855
AEB85913.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2468 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.849
AEB85912.1
KEGG: ajs:Ajs_3121 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
  
 0.832
AEB82644.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: ajs:Ajs_0155 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.700
AEB84060.1
KEGG: rpi:Rpic_2632 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain.
       0.658
AEB84061.1
Alpha-methylacyl-CoA racemase; KEGG: rpi:Rpic_2631 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.658
AEB84062.1
KEGG: rpi:Rpic_2630 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
       0.658
AEB86999.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dac:Daci_6025 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.644
AEB82645.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: vei:Veis_0860 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.633
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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