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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84069.1Formyl-CoA transferase; KEGG: dia:Dtpsy_2359 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (401 aa)    
Predicted Functional Partners:
AEB84070.1
Hydroxymethylglutaryl-CoA lyase; KEGG: dia:Dtpsy_2358 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase.
 
  
  0.881
AEB84071.1
KEGG: dia:Dtpsy_2357 hypothetical protein.
  
    0.636
AEB84067.1
KEGG: ajs:Ajs_2874 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP015557; PFAM: Uncharacterised conserved protein UCP015557.
       0.534
AEB84068.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_2873 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.534
AEB84072.1
KEGG: ajs:Ajs_2869 hypothetical protein.
  
    0.524
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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