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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84077.1ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xtr:100494207 probable ABC transporter permease protein BruAb2_1124-like. (279 aa)    
Predicted Functional Partners:
AEB84078.1
Taurine-transporting ATPase; PFAM: ABC transporter-like; KEGG: xtr:100494366 uncharacterized ABC transporter ATP-binding protein MJ0412-like; SMART: ATPase, AAA+ type, core.
 
  
 0.989
AEB84076.1
KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system.
 
  
 0.971
AEB85977.1
Taurine-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2681 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.865
AEB84079.1
Transcriptional regulator, GntR family with UTRA sensor domain; TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: aav:Aave_2966 histidine utilization repressor; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR.
  
  
 0.753
AEB85508.1
Hypothetical protein; KEGG: aav:Aave_2648 putative signal peptide protein.
 
  
 0.704
AEB85978.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component.
  
     0.693
AEB85979.1
KEGG: dia:Dtpsy_2687 putative periplasmic component of ABC-type transport system.
  
  
 0.644
hutH
PFAM: Phenylalanine/histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: aav:Aave_2965 histidine ammonia-lyase.
       0.624
AEB83161.1
Luciferase family oxidoreductase, group 1; KEGG: ajs:Ajs_0664 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup.
  
  
 0.489
AEB84075.1
Butyryl-CoA dehydrogenase; KEGG: xtr:100494035 short-chain specific acyl-CoA dehydrogenase, mitochondrial-like; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
  
    0.471
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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