STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (573 aa)    
Predicted Functional Partners:
hutH
PFAM: Phenylalanine/histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: aav:Aave_2965 histidine ammonia-lyase.
 
 0.999
hutI
TIGRFAM: Imidazolonepropionase; KEGG: pol:Bpro_1035 imidazolonepropionase; PFAM: Amidohydrolase 1.
 
 
 0.998
AEB84090.1
KEGG: dac:Daci_0155 N-formimino-L-glutamate deiminase; TIGRFAM: Formiminoglutamate deiminase; PFAM: Amidohydrolase 1.
 
  
 0.888
AEB84081.1
Transcriptional regulator, GntR family with UTRA sensor domain; TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: ctt:CtCNB1_0165 transcriptional regulator, histidine; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR.
 
  
 0.840
AEB84091.1
KEGG: aav:Aave_2959 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate deformylase; PFAM: N-formylglutamate amidohydrolase.
 
  
 0.819
AEB84088.1
PFAM: Uncharacterised protein family HutD; KEGG: aav:Aave_2962 hypothetical protein.
 
  
 0.812
AEB84082.1
PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: ctt:CtCNB1_0166 cytosine/purines/uracil permease; Belongs to the purine-cytosine permease (2.A.39) family.
 
    0.766
AEB84079.1
Transcriptional regulator, GntR family with UTRA sensor domain; TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: aav:Aave_2966 histidine utilization repressor; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR.
 
  
 0.746
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.676
AEB82753.1
Arginase; TIGRFAM: Arginase, subgroup; KEGG: dia:Dtpsy_0241 arginase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
  
 0.628
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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