close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84127.1KEGG: tmz:Tmz1t_0998 hypothetical protein. (78 aa)    
Predicted Functional Partners:
AEB84128.1
Integrating conjugative element, PFGI-1, ParB; KEGG: tmz:Tmz1t_0997 hypothetical protein; manually curated; TIGRFAM: Integrating conjugative element, PFGI-1, ParB.
       0.833
AEB84126.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: tmz:Tmz1t_0999 cobyrinic acid ac-diamide synthase.
       0.822
AEB84130.1
KEGG: mpt:Mpe_A2336 hypothetical protein.
       0.793
AEB84129.1
KEGG: mpt:Mpe_A2335 hypothetical protein.
       0.790
AEB84125.1
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: tmz:Tmz1t_1000 phage transcriptional regulator, AlpA.
       0.696
AEB84124.1
KEGG: tmz:Tmz1t_1001 hypothetical protein.
  
    0.534
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.