STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84143.1KEGG: mpt:Mpe_A2364 hypothetical protein. (121 aa)    
Predicted Functional Partners:
AEB84144.1
KEGG: tmz:Tmz1t_0975 hypothetical protein.
       0.579
AEB84142.1
KEGG: mpt:Mpe_A2363 hypothetical protein.
       0.574
AEB84141.1
KEGG: mpt:Mpe_A2362 hypothetical protein.
       0.470
AEB84145.1
KEGG: tmz:Tmz1t_0974 hypothetical protein.
       0.463
AEB84146.1
KEGG: ajs:Ajs_2221 hypothetical protein.
  
    0.418
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.