STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84149.1KEGG: sfu:Sfum_0092 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter. (391 aa)    
Predicted Functional Partners:
AEB84148.1
PFAM: Chromate resistance exported protein; KEGG: har:HEAR0891 putative chromate resistance protein.
 
   
 0.775
AEB85195.1
PFAM: Chromate transporter; KEGG: dia:Dtpsy_1614 chromate transporter.
 
     0.685
AEB84150.1
PFAM: Manganese/iron superoxide dismutase, C-terminal; KEGG: rme:Rmet_6201 manganese and iron superoxide dismutase.
       0.606
AEB84154.1
PFAM: Chromate resistance exported protein; KEGG: bph:Bphy_5141 ChrB protein.
   
 0.457
AEB84318.1
PFAM: Chromate resistance exported protein; KEGG: bxe:Bxe_C1204 hypothetical protein.
   
 0.449
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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