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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84155.1PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_6018 major facilitator superfamily MFS_1. (404 aa)    
Predicted Functional Partners:
AEB84154.1
PFAM: Chromate resistance exported protein; KEGG: bph:Bphy_5141 ChrB protein.
 
     0.811
AEB84158.1
PFAM: NHL repeat; KEGG: phe:Phep_1359 NHL repeat containing protein.
     
 0.529
AEB84157.1
TIGRFAM: Signal transduction histidine kinase, heavy metal sensor; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; KEGG: gbm:Gbem_2673 HAMP domain-containing sensor histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain.
     
 0.525
AEB84156.1
KEGG: gbm:Gbem_2672 winged-helix transcriptional response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
     
 0.524
AEB84153.1
Protein of unknown function LppY and LpqO; PFAM: Uncharacterised protein family, LppY/LpqO; KEGG: pop:POPTR_594759 hypothetical protein.
       0.523
AEB84159.1
KEGG: nwa:Nwat_1254 hypothetical protein.
       0.441
AEB84160.1
KEGG: mno:Mnod_2229 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.441
AEB84162.1
KEGG: mno:Mnod_2227 hypothetical protein.
 
   
 0.400
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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