STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84161.1KEGG: bvi:Bcep1808_7485 hypothetical protein. (428 aa)    
Predicted Functional Partners:
AEB84162.1
KEGG: mno:Mnod_2227 hypothetical protein.
 
     0.910
AEB84163.1
KEGG: bvi:Bcep1808_7486 hypothetical protein.
 
     0.910
AEB83771.1
Nitrous oxide expression regulator, NosR; KEGG: dia:Dtpsy_1059 FMN-binding domain protein; PFAM: FMN-binding; SMART: FMN-binding.
  
  
 0.658
AEB86723.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; ABC-2 type transporter; KEGG: ajs:Ajs_2361 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.648
nodI
Fe(3+)-transporting ATPase; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.
  
 
 0.624
AEB83240.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0722 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.624
AEB83769.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_1057 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.624
AEB83973.1
PFAM: ABC transporter-like; KEGG: pag:PLES_25911 ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
 
 0.624
AEB84114.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: tmz:Tmz1t_1019 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.624
AEB84160.1
KEGG: mno:Mnod_2229 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
     0.574
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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