STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84192.1KEGG: app:CAP2UW1_2947 hypothetical protein. (172 aa)    
Predicted Functional Partners:
AEB84190.1
KEGG: app:CAP2UW1_2945 hypothetical protein.
       0.517
AEB84193.1
KEGG: ajs:Ajs_2183 hypothetical protein; TIGRFAM: Integrating conjugative element protein, PFL4709; PFAM: Integrating conjugative element protein, PFL4709.
       0.498
AEB84194.1
KEGG: eba:ebA2511 hypothetical protein; TIGRFAM: Integrating conjugative element protein, PFL4710; PFAM: Integrating conjugative element protein, PFL4710.
       0.498
AEB84191.1
KEGG: app:CAP2UW1_2946 N-6 DNA methylase.
       0.494
AEB84195.1
TIGRFAM: Integrating conjugative element protein, PFL4711; KEGG: ajs:Ajs_2181 hypothetical protein.
       0.489
AEB84196.1
KEGG: ajs:Ajs_2180 hypothetical protein.
       0.489
AEB84197.1
KEGG: ajs:Ajs_2179 hypothetical protein.
       0.468
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.