STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84199.1KEGG: mpt:Mpe_A2403 hypothetical protein. (252 aa)    
Predicted Functional Partners:
AEB84200.1
PFAM: Protein of unknown function DUF1814; KEGG: ajs:Ajs_2176 hypothetical protein.
 
   
 0.955
AEB84112.1
KEGG: tmz:Tmz1t_1021 hypothetical protein.
  
     0.698
AEB84122.1
KEGG: tmz:Tmz1t_1007 hypothetical protein.
  
     0.662
AEB84049.1
KEGG: dia:Dtpsy_1144 hypothetical protein.
  
     0.649
AEB84174.1
PFAM: Abortive phage infection; KEGG: pph:Ppha_0341 hypothetical protein.
  
     0.595
AEB84121.1
PFAM: Protein of unknown function DUF2219; KEGG: rme:Rmet_1261 hypothetical protein.
  
     0.589
AEB84341.1
PFAM: LysR, substrate-binding; KEGG: rpf:Rpic12D_0696 transcriptional regulator, LysR family.
  
     0.568
AEB84050.1
KEGG: xtr:100489290 hypothetical protein LOC100489290.
  
     0.560
AEB84201.1
KEGG: ajs:Ajs_2175 relaxase; TIGRFAM: Integrating conjugative element relaxase, PFGI-1 class; PFAM: Uncharacterised protein family, helicase/relaxase, putative; Domain of unknown function DUF1528, C-terminal.
 
     0.549
AEB84338.1
Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted; KEGG: dac:Daci_4189 AbrB family transcriptional regulator; SMART: Transcription regulator AbrB/SpoV, predicted.
  
     0.519
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.