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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84244.1Formyl-CoA transferase; KEGG: bbr:BB4584 hypothetical protein; PFAM: CoA-transferase family III. (421 aa)    
Predicted Functional Partners:
AEB84245.1
KEGG: bur:Bcep18194_C7492 acyl-CoA dehydrogenase-like; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain.
  
 
  0.802
AEB84246.1
PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_C7491 MaoC-like dehydratase.
    
 0.744
AEB84243.1
KEGG: bbr:BB3950 hypothetical protein.
  
    0.577
AEB84247.1
KEGG: bpt:Bpet1156 hypothetical protein.
    
 0.547
AEB84242.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: bur:Bcep18194_C7308 MmgE/PrpD.
  
    0.544
AEB84240.1
Alpha-methylacyl-CoA racemase; Manually curated; KEGG: mau:Micau_2811 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
 
    
0.526
AEB84241.1
KEGG: rpa:RPA4552 4-hydroxybutyrate-CoA transferase/hydrolase.
   
   0.517
AEB84239.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: pla:Plav_2055 alpha/beta hydrolase fold.
       0.428
AEB84249.1
Enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; KEGG: bpt:Bpet1158 putative enoyl-CoA hydratase/isomerase.
    
 0.418
AEB84250.1
PFAM: Crotonase, core; KEGG: axy:AXYL_06657 enoyl-CoA hydratase/isomerase family protein 35.
    
 0.414
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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