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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84256.1PFAM: Protein of unknown function DUF1446; KEGG: bpt:Bpet1151 hypothetical protein. (458 aa)    
Predicted Functional Partners:
AEB84255.1
KEGG: bpt:Bpet1152 hypothetical protein.
 
     0.947
AEB84254.1
KEGG: bpt:Bpet1153 putative propionyl-CoA carboxylase beta subunit; PFAM: Carboxyl transferase.
  
  
 0.854
AEB84253.1
Methylcrotonoyl-CoA carboxylase, Pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: bpt:Bpet1154 putative biotin carboxylase subunit of propionyl-CoA carboxylase; SMART: Biotin carboxylase, C-terminal.
  
  
 0.829
AEB83888.1
KEGG: bbt:BBta_2933 hypothetical protein.
     0.823
AEB85376.1
KEGG: dia:Dtpsy_1909 hypothetical protein.
 
     0.785
AEB86827.1
KEGG: ctt:CtCNB1_4654 hypothetical protein.
 
     0.785
AEB84251.1
KEGG: axy:AXYL_06658 transcriptional regulator family protein 40; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
       0.616
AEB84252.1
KEGG: axy:AXYL_06659 transcriptional regulator family protein 41; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
       0.616
AEB84257.1
KEGG: reh:H16_B1907 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
       0.511
AEB84840.1
TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: dia:Dtpsy_1849 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding.
     
 0.443
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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