STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84303.1KEGG: ppd:Ppro_3851 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (383 aa)    
Predicted Functional Partners:
AEB84305.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: ppd:Ppro_3849 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.968
AEB84304.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: ppd:Ppro_3850 hypothetical protein.
 
 
 0.956
AEB84302.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: maq:Maqu_1250 TetR family transcriptional regulator.
 
   
 0.949
AEB84307.1
KEGG: maq:Maqu_1255 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
 
 
 0.932
AEB84306.1
KEGG: ppd:Ppro_3848 hypothetical protein.
 
    0.911
AEB84687.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: ajs:Ajs_1836 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.866
AEB84686.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_1686 protein of unknown function DUF214.
 
 
 0.814
AEB84684.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ajs:Ajs_1833 TetR family transcriptional regulator.
 
   
 0.784
AEB84111.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: tmz:Tmz1t_1022 transcriptional regulator, TetR family.
 
   
 0.781
AEB84932.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2312 protein of unknown function DUF214.
 
 
 0.683
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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