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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84316.1Protein of unknown function LppY and LpqO; PFAM: Uncharacterised protein family, LppY/LpqO; KEGG: pop:POPTR_594759 hypothetical protein. (300 aa)    
Predicted Functional Partners:
AEB84318.1
PFAM: Chromate resistance exported protein; KEGG: bxe:Bxe_C1204 hypothetical protein.
 
     0.623
AEB84315.1
KEGG: bvi:Bcep1808_7475 hypothetical protein.
       0.613
AEB84317.1
KEGG: bxe:Bxe_C1203 hypothetical protein.
       0.588
AEB84319.1
KEGG: bxe:Bxe_C1205 putative superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; SMART: Rhodanese-like.
  
    0.561
AEB84320.1
KEGG: bxe:Bxe_C1206 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter.
 
     0.555
AEB84313.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: art:Arth_4258 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
       0.491
AEB84314.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: art:Arth_4257 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
       0.491
AEB84312.1
PFAM: Aminoglycoside phosphotransferase; KEGG: bxe:Bxe_C1178 hypothetical protein.
       0.473
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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