STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84321.1PFAM: Chromate resistance exported protein; KEGG: bxe:Bxe_C1207 putative chromate resistance protein. (320 aa)    
Predicted Functional Partners:
AEB84320.1
KEGG: bxe:Bxe_C1206 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter.
 
   
 0.897
AEB84319.1
KEGG: bxe:Bxe_C1205 putative superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; SMART: Rhodanese-like.
 
   
 0.694
AEB84318.1
PFAM: Chromate resistance exported protein; KEGG: bxe:Bxe_C1204 hypothetical protein.
 
    
0.610
AEB84317.1
KEGG: bxe:Bxe_C1203 hypothetical protein.
       0.452
AEB85968.1
PFAM: Protein of unknown function DUF839; KEGG: aav:Aave_1926 putative exported alkaline phosphatase.
  
     0.428
AEB84541.1
KEGG: bpr:GBP346_A0950 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.413
AEB83987.1
Helix-turn-helix domain protein; KEGG: rme:Rmet_1249 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.