STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84331.1KEGG: rpf:Rpic12D_0686 protein of unknown function DUF1525; TIGRFAM: Integrating conjugative element protein, PFL4709; PFAM: Integrating conjugative element protein, PFL4709. (148 aa)    
Predicted Functional Partners:
AEB84332.1
KEGG: rpf:Rpic12D_0687 protein of unknown function DUF1527; TIGRFAM: Integrating conjugative element protein, PFL4710; PFAM: Integrating conjugative element protein, PFL4710.
       0.794
AEB84333.1
TIGRFAM: Integrating conjugative element protein, PFL4711; KEGG: rpf:Rpic12D_0688 hypothetical protein.
       0.778
AEB84334.1
KEGG: rpf:Rpic12D_0689 hypothetical protein.
       0.769
AEB84335.1
KEGG: rpf:Rpic12D_0690 hypothetical protein.
       0.710
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.