STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84339.1KEGG: rpf:Rpic12D_0694 relaxase; TIGRFAM: Integrating conjugative element relaxase, PFGI-1 class; PFAM: Uncharacterised protein family, helicase/relaxase, putative; Domain of unknown function DUF1528, C-terminal. (621 aa)    
Predicted Functional Partners:
AEB84195.1
TIGRFAM: Integrating conjugative element protein, PFL4711; KEGG: ajs:Ajs_2181 hypothetical protein.
 
  
 0.795
AEB84333.1
TIGRFAM: Integrating conjugative element protein, PFL4711; KEGG: rpf:Rpic12D_0688 hypothetical protein.
 
  
 0.795
AEB84128.1
Integrating conjugative element, PFGI-1, ParB; KEGG: tmz:Tmz1t_0997 hypothetical protein; manually curated; TIGRFAM: Integrating conjugative element, PFGI-1, ParB.
 
  
 0.794
AEB84187.1
TIGRFAM: Conjugative transfer ATPase, PFL4706; KEGG: tmz:Tmz1t_0948 hypothetical protein.
 
   
 0.786
AEB84299.1
TIGRFAM: Conjugative transfer ATPase, PFL4706; KEGG: rpf:Rpic12D_0683 hypothetical protein.
 
   
 0.786
AEB84134.1
PFAM: Primosome PriB/single-strand DNA-binding; KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein.
 
   
 0.785
AEB84261.1
PFAM: Primosome PriB/single-strand DNA-binding; KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein.
 
   
 0.785
AEB84188.1
KEGG: tmz:Tmz1t_0947 hypothetical protein.
 
  
 0.784
AEB84300.1
PFAM: DSBA-like thioredoxin domain; KEGG: rpf:Rpic12D_0684 DsbA oxidoreductase.
 
  
 0.783
AEB84126.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: tmz:Tmz1t_0999 cobyrinic acid ac-diamide synthase.
 
   
 0.781
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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