STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84367.1KEGG: rsl:RPSI07_0202 putative bacteriophage-related protein. (123 aa)    
Predicted Functional Partners:
AEB84369.1
KEGG: mfa:Mfla_1156 hypothetical protein.
 
   
 0.950
AEB84368.1
Resolvase domain protein; KEGG: nde:NIDE0070 putative site-specific recombinase, resolvase family (phage related); PFAM: Resolvase, N-terminal; Recombinase; SMART: Resolvase, N-terminal.
 
   
 0.949
AEB84375.1
KEGG: mca:MCA2640 hypothetical protein.
 
    0.839
AEB84376.1
KEGG: mms:mma_2689 hypothetical protein.
 
     0.829
AEB84378.1
KEGG: dia:Dtpsy_3225 hypothetical protein.
 
     0.826
AEB84366.1
KEGG: rsl:RPSI07_0201 putative bacteriophage-related protein.
 
    
0.824
AEB84377.1
KEGG: nde:NIDE0081 hypothetical protein.
 
     0.822
AEB84381.1
KEGG: dia:Dtpsy_3223 hypothetical protein.
 
     0.821
AEB84386.1
KEGG: sml:Smlt1883 hypothetical protein.
 
     0.792
AEB84445.1
PFAM: Protein of unknown function DUF2924; KEGG: mca:MCA2635 hypothetical protein.
 
   
 0.789
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.