STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84394.1KEGG: mms:mma_2706 hypothetical protein. (163 aa)    
Predicted Functional Partners:
AEB84393.1
PFAM: Phage terminase GpA; KEGG: dia:Dtpsy_3209 terminase GpA.
  
  
 0.934
AEB84399.1
KEGG: dia:Dtpsy_3205 hypothetical protein.
  
  
 0.928
AEB86304.1
GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: cag:Cagg_1491 gpW/GP25 family protein.
  
  
 0.815
AEB86307.1
KEGG: nde:NIDE2231 hypothetical protein.
  
  
 0.808
AEB84397.1
Manually curated; TIGRFAM: Phage portal protein, lambda; KEGG: dia:Dtpsy_3207 phage portal protein, lambda family; PFAM: Phage portal protein, lambda.
  
    0.801
AEB84395.1
KEGG: mms:mma_2767 hypothetical protein.
       0.796
AEB84396.1
KEGG: rsl:RPSI07_0240 hypothetical protein.
       0.796
AEB86318.1
KEGG: nha:Nham_0832 phage tail sheath protein.
  
  
 0.791
AEB84408.1
TIGRFAM: Tape measure domain; KEGG: dia:Dtpsy_3197 phage tape measure protein.
  
    0.785
AEB84392.1
KEGG: sml:Smlt1874 hypothetical protein.
       0.707
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.