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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84432.1KEGG: mfa:Mfla_1160 hypothetical protein. (156 aa)    
Predicted Functional Partners:
AEB84431.1
PFAM: Peptidase M48; KEGG: mfa:Mfla_1159 peptidase M48, Ste24p.
 
     0.912
AEB84430.1
KEGG: mfa:Mfla_1158 DegP2 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF.
 
     0.808
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
 
     0.791
AEB84436.1
KEGG: mfa:Mfla_1170 ATPase AAA-2; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family.
 
     0.790
AEB84437.1
PFAM: Heat shock protein Hsp20; KEGG: rpf:Rpic12D_0629 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
 
     0.745
AEB84435.1
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
 
     0.719
AEB84433.1
TIGRFAM: Thioredoxin; KEGG: dde:Dde_3416 thioredoxin; PFAM: Thioredoxin domain.
 
     0.682
AEB84438.1
Manually curated; TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: mfa:Mfla_1172 phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory.
 
     0.444
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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