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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84457.1PFAM: Protein of unknown function DUF1778; KEGG: afr:AFE_1418 hypothetical protein. (88 aa)    
Predicted Functional Partners:
AEB84456.1
Manually curated; KEGG: afr:AFE_1417 acetyltransferase, GNAT family.
 
 
 0.989
AEB85492.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aav:Aave_2657 GCN5-related N-acetyltransferase.
   
 
 0.751
AEB86792.1
KEGG: dia:Dtpsy_3290 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain.
   
 
 0.751
AEB83996.1
PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: rme:Rmet_1246 GCN5-related N-acetyltransferase.
   
   0.670
AEB84455.1
KEGG: sde:Sde_2785 hypothetical protein.
       0.506
AEB84458.1
PFAM: Major facilitator superfamily MFS-1; KEGG: ajs:Ajs_1692 major facilitator superfamily transporter.
       0.430
AEB84199.1
KEGG: mpt:Mpe_A2403 hypothetical protein.
  
   
 0.426
AEB84049.1
KEGG: dia:Dtpsy_1144 hypothetical protein.
  
     0.424
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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