STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84466.1KEGG: ajs:Ajs_1629 hypothetical protein. (186 aa)    
Predicted Functional Partners:
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
       0.781
AEB84468.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_1631 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.554
AEB85580.1
Protein of unknown function DUF6 transmembrane; KEGG: axy:AXYL_03456 hypothetical protein; manually curated; PFAM: Drug/metabolite transporter.
 
     0.502
AEB83700.1
PFAM: Peptidase S16, lon N-terminal; KEGG: xtr:100498456 hypothetical protein LOC100498456.
  
     0.445
AEB83412.1
PFAM: Protein of unknown function DUF81; KEGG: bpa:BPP0894 hypothetical protein.
  
     0.437
AEB86744.1
PsiF repeat-containing protein; PFAM: Phosphate-starvation-induced PsiF repeat; KEGG: dia:Dtpsy_0331 PsiF repeat protein.
  
     0.408
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.