STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84479.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B2224 putative metallothiol transferase. (127 aa)    
Predicted Functional Partners:
AEB84480.1
KEGG: hse:Hsero_2301 hypothetical protein.
     
 0.638
AEB84478.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cti:RALTA_B2225 putative transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     
 0.539
AEB82590.1
KEGG: dia:Dtpsy_0137 hypothetical protein.
  
    0.520
AEB83917.1
KEGG: bbr:BB0622 hypothetical protein.
  
    0.520
AEB86236.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: nmg:Nmag_3457 MmgE/PrpD family protein.
 
    0.519
AEB84583.1
KEGG: dia:Dtpsy_2283 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit.
  
  
 0.496
AEB86258.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: vei:Veis_4268 MmgE/PrpD family protein.
 
    0.490
AEB82904.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: vei:Veis_1585 MmgE/PrpD family protein.
 
    0.486
AEB83901.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: bur:Bcep18194_C6759 MmgE/PrpD.
 
    0.485
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
  
 0.484
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.