STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84490.1PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: ajs:Ajs_1649 protein of unknown function DUF395, YeeE/YedE. (365 aa)    
Predicted Functional Partners:
AEB84491.1
Rhodanese-like protein; KEGG: dia:Dtpsy_2054 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
 
  
 0.898
AEB84489.1
KEGG: dia:Dtpsy_2056 hypothetical protein.
       0.792
AEB84028.1
PFAM: SirA-like; KEGG: dia:Dtpsy_2384 SirA family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.565
AEB84488.1
KEGG: ctt:CtCNB1_3704 putative lipoprotein.
       0.442
AEB85443.1
TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: dia:Dtpsy_1931 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding.
   
  
 0.404
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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