STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84501.1PFAM: Lytic transglycosylase-like, catalytic; KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic. (270 aa)    
Predicted Functional Partners:
AEB83426.1
PFAM: Protein of unknown function DUF3460; KEGG: ajs:Ajs_3491 hypothetical protein.
  
    0.722
AEB85016.1
KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein.
 
    0.715
AEB85966.1
KEGG: ajs:Ajs_3321 hypothetical protein.
  
     0.714
AEB84508.1
PFAM: Thioredoxin domain; KEGG: dia:Dtpsy_1244 hypothetical protein.
  
 
   0.695
AEB87006.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.670
AEB86734.1
Protein of unknown function DUF132; KEGG: dia:Dtpsy_0340 hypothetical protein; TIGRFAM: Protein of unknown function DUF132; SMART: Nucleotide binding protein, PINc.
  
     0.642
AEB85617.1
KEGG: dia:Dtpsy_1366 phasin family protein; TIGRFAM: Phasin, subfamily 1; PFAM: Phasin.
  
     0.641
AEB85391.1
KEGG: dia:Dtpsy_2253 hypothetical protein.
  
    0.626
AEB86160.1
KEGG: dia:Dtpsy_2944 histone protein.
  
     0.619
AEB83828.1
Protein of unknown function DUF540; PFAM: Uncharacterised protein family CysZ; KEGG: dia:Dtpsy_1107 putative transmembrane protein.
  
     0.607
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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