Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB84523.1KEGG: ajs:Ajs_2549 hypothetical protein. (167 aa)    
Predicted Functional Partners:
AEB82745.1
KEGG: dia:Dtpsy_0229 hypothetical protein.
  
     0.773
AEB86390.1
KEGG: dia:Dtpsy_2992 hypothetical protein.
  
     0.770
AEB84774.1
PFAM: Glutaredoxin; KEGG: dia:Dtpsy_1652 glutaredoxin.
  
     0.764
AEB86873.1
PFAM: Protein of unknown function DUF1631; KEGG: dia:Dtpsy_3353 hypothetical protein.
  
    0.763
AEB86845.1
Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_3342 sporulation domain protein.
  
     0.762
AEB85036.1
KEGG: ajs:Ajs_2388 hypothetical protein.
  
     0.757
AEB83677.1
KEGG: dia:Dtpsy_2621 putative transmembrane protein.
  
     0.754
AEB86207.1
CheW protein; KEGG: ajs:Ajs_3576 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
  
     0.753
AEB82664.1
Fertility inhibition FinO-like protein; KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP; PFAM: Fertility inhibition FinO/ProQ; SMART: Fertility inhibition FinO/ProQ.
  
    0.750
AEB83831.1
Hypothetical protein; KEGG: dia:Dtpsy_1110 putative signal peptide protein.
  
     0.748
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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