Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84532.1KEGG: dia:Dtpsy_3534 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease. (688 aa)    
Predicted Functional Partners:
AEB84531.1
PFAM: Protein of unknown function DUF932; KEGG: sml:Smlt1327 hypothetical protein.
 
    0.873
AEB83979.1
PFAM: Peptidase S26, conserved region; KEGG: rme:Rmet_1258 TraF peptidase.
 
   
 0.770
AEB84551.1
PFAM: Peptidase S26, conserved region; KEGG: rme:Rmet_1258 TraF peptidase.
 
   
 0.769
AEB85321.1
PFAM: Peptidase S26, conserved region; KEGG: dia:Dtpsy_1292 TraF peptidase. Serine peptidase. MEROPS family S26C.
 
   
 0.769
AEB85318.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dac:Daci_2720 cobyrinic acid ac-diamide synthase.
 
 
 0.767
AEB83982.1
KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase; manually curated; PFAM: Cobyrinic acid a,c-diamide synthase.
 
 
 0.766
AEB84548.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rme:Rmet_1255 cobyrinic acid a,c-diamide synthase.
 
 
 0.760
AEB84552.1
KEGG: pau:PA14_31070 hypothetical protein.
  
   
 0.747
AEB83977.1
KEGG: pap:PSPA7_3726 hypothetical protein.
  
   
 0.746
AEB85322.1
KEGG: dac:Daci_0453 hypothetical protein.
  
   
 0.744
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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