STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84563.1KEGG: dia:Dtpsy_2194 hypothetical protein. (92 aa)    
Predicted Functional Partners:
AEB84564.1
KEGG: dia:Dtpsy_2193 isoprenylcysteine carboxyl methyltransferase.
 
    0.949
AEB84562.1
KEGG: dia:Dtpsy_2195 hypothetical protein.
 
     0.841
AEB85102.1
PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: ajs:Ajs_1466 isoprenylcysteine carboxyl methyltransferase.
 
    0.785
AEB84559.1
KEGG: bmj:BMULJ_00902 copper resistance protein B; manually curated; PFAM: Copper resistance B precursor.
 
   
 0.704
AEB84561.1
KEGG: ajs:Ajs_2667 hypothetical protein.
 
     0.626
AEB84567.1
KEGG: rpf:Rpic12D_5298 hypothetical protein.
 
     0.601
AEB84565.1
Hypothetical protein.
       0.598
AEB85104.1
KEGG: ajs:Ajs_1464 hypothetical protein.
 
     0.595
AEB84556.1
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
     0.563
AEB84560.1
PFAM: Blue (type 1) copper domain; KEGG: net:Neut_0023 blue (type1) copper domain-containing protein.
 
     0.524
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.