Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB84628.1PFAM: NUDIX hydrolase domain; KEGG: pna:Pnap_2699 NUDIX hydrolase. (293 aa)    
Predicted Functional Partners:
AEB84629.1
KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.647
gshA
TIGRFAM: Glutamate--cysteine ligase, monofunctional; KEGG: dia:Dtpsy_1339 glutamate/cysteine ligase; PFAM: Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
  
 0.473
AEB86870.1
Regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; KEGG: ajs:Ajs_4000 MarR family transcriptional regulator.
  
  
 0.472
AEB86075.1
KEGG: aav:Aave_1061 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A.
 
     0.467
AEB84462.1
KEGG: ajs:Ajs_1699 putative glutathione S-transferase-related protein.
  
 
 
 0.463
AEB84851.1
Rhodanese-like protein; KEGG: pna:Pnap_2832 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
 
 
 0.446
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
 
  
 0.443
AEB82868.1
Putative transcriptional regulator, Crp/Fnr family; KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
 
     0.442
AEB83406.1
Rhodanese-like protein; KEGG: dia:Dtpsy_2827 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
 
 
 0.433
AEB82575.1
Alpha-methylacyl-CoA racemase; KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.417
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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