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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84649.1Aspartate ammonia-lyase; KEGG: dia:Dtpsy_1365 fumarate lyase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal. (467 aa)    
Predicted Functional Partners:
AEB83634.1
PFAM: Asparaginase/glutaminase; KEGG: axy:AXYL_04759 L-asparaginase 1; SMART: Asparaginase/glutaminase.
  
 
 0.953
AEB85295.1
PFAM: Asparaginase/glutaminase; KEGG: dia:Dtpsy_1550 asparaginase; SMART: Asparaginase/glutaminase.
  
 
 0.953
AEB87034.1
KEGG: aav:Aave_1663 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family.
   
 0.931
AEB83422.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 0.920
argH
TIGRFAM: Argininosuccinate lyase; KEGG: dia:Dtpsy_2664 argininosuccinate lyase; PFAM: Lyase 1, N-terminal.
     
0.915
AEB85502.1
KEGG: rso:RSp1232 aspartate aminotransferase A protein; PFAM: Aminotransferase, class I/classII.
    
 0.912
AEB86890.1
TIGRFAM: Adenylosuccinate lyase; KEGG: dia:Dtpsy_3376 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal/plant; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.909
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.908
AEB87041.1
Beta-aspartyl-peptidase; KEGG: aav:Aave_1656 asparaginase; PFAM: Peptidase T2, asparaginase 2.
    
 0.908
AEB83114.1
TIGRFAM: Exosortase 1 system-associated amidotransferase 1; Asparagine synthase, glutamine-hydrolyzing; KEGG: rfr:Rfer_0669 asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II.
     
 0.905
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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