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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84650.1PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: dac:Daci_2483 hypothetical protein. (268 aa)    
Predicted Functional Partners:
AEB83976.1
KEGG: sml:Smlt1841 hypothetical protein.
  
     0.750
AEB84602.1
KEGG: dia:Dtpsy_2274 hypothetical protein.
  
     0.663
AEB84651.1
PFAM: Protein of unknown function DUF924; KEGG: hel:HELO_3084 protein of unknown function DUF924.
 
     0.653
AEB83639.1
KEGG: dia:Dtpsy_2653 hypothetical protein.
  
     0.627
glnS
TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; KEGG: ajs:Ajs_1608 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain.
       0.569
AEB86512.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.537
AEB82556.1
PFAM: Haemerythrin/HHE cation-binding motif; KEGG: dia:Dtpsy_0108 hemerythrin HHE cation binding domain-containing protein.
  
     0.478
AEB83690.1
PFAM: Mechanosensitive ion channel MscS; KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein.
 
     0.453
AEB85637.1
KEGG: dia:Dtpsy_2126 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
  
    0.428
AEB85531.1
KEGG: app:CAP2UW1_0424 hypothetical protein.
    
   0.426
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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