Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB84651.1PFAM: Protein of unknown function DUF924; KEGG: hel:HELO_3084 protein of unknown function DUF924. (179 aa)    
Predicted Functional Partners:
glnS
TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; KEGG: ajs:Ajs_1608 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain.
       0.740
AEB84650.1
PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: dac:Daci_2483 hypothetical protein.
 
     0.652
AEB84653.1
KEGG: dia:Dtpsy_2105 hypothetical protein.
       0.503
AEB84904.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
     0.434
AEB83220.1
PFAM: Protein of unknown function DUF1415; KEGG: dia:Dtpsy_0706 protein of unknown function DUF1415.
 
     0.432
AEB86839.1
PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: ajs:Ajs_3976 glutathione S-transferase domain-containing protein; Belongs to the GST superfamily.
 
     0.424
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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