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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84664.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hmg:100212933 similar to lysR transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
AEB82596.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0188 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.768
AEB84638.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pol:Bpro_4347 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.766
AEB83314.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0783 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.740
AEB86829.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_4656 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.739
AEB83611.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2826 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.734
AEB87033.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aav:Aave_1935 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.706
AEB84665.1
KEGG: vap:Vapar_5148 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
  
  
 0.679
AEB85876.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: axy:AXYL_03752 LysR family regulatory helix-turn-helix protein 123.
  
     0.668
AEB83750.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: axy:AXYL_05357 LysR family regulatory helix-turn-helix protein 171.
  
     0.655
AEB84101.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2361 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.639
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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