STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84676.1ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG. (456 aa)    
Predicted Functional Partners:
AEB84677.1
PFAM: Tetratricopeptide TPR-1; KEGG: aav:Aave_2319 TPR repeat-containing protein.
 
     0.907
AEB84675.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.796
lpxH
Metallophosphoesterase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.770
AEB84672.1
PFAM: Protein of unknown function DUF980; KEGG: ajs:Ajs_1618 hypothetical protein; Belongs to the MtfA family.
       0.762
AEB84674.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.740
AEB86903.1
KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
  
     0.726
AEB86512.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
   0.657
AEB82500.1
KEGG: ajs:Ajs_0032 methyltransferase type 12.
  
     0.617
AEB85192.1
KEGG: ajs:Ajs_2412 hypothetical protein.
  
     0.604
AEB83677.1
KEGG: dia:Dtpsy_2621 putative transmembrane protein.
  
     0.556
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.