STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
AEB84712.1Hydroxylamine reductase; KEGG: dia:Dtpsy_1710 cytochrome d1 heme region; PFAM: Cytochrome c, class I. (531 aa)    
Predicted Functional Partners:
AEB82557.1
KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit.
  
 
 0.968
AEB84714.1
KEGG: ajs:Ajs_1907 AsnC family transcriptional regulator.
 
  
 0.968
AEB84715.1
Hypothetical protein; KEGG: dia:Dtpsy_1714 putative transcriptional regulator, AsnC family.
 
  
 0.968
AEB84713.1
KEGG: dia:Dtpsy_1711 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
 
  
 0.963
AEB84717.1
KEGG: dia:Dtpsy_1716 hypothetical protein.
 
  
 0.962
AEB83272.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.930
AEB84716.1
KEGG: ajs:Ajs_1910 cytochrome d1, heme region.
 
 
0.904
AEB83452.1
KEGG: dia:Dtpsy_2798 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
 
 0.844
AEB84718.1
KEGG: dia:Dtpsy_1717 hydroxylamine reductase; PFAM: Cytochrome c, class I.
 
    
0.794
AEB86226.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain; KEGG: app:CAP2UW1_1327 methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.743
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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