STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84713.1KEGG: dia:Dtpsy_1711 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB. (406 aa)    
Predicted Functional Partners:
AEB84714.1
KEGG: ajs:Ajs_1907 AsnC family transcriptional regulator.
 
  
 0.985
AEB84715.1
Hypothetical protein; KEGG: dia:Dtpsy_1714 putative transcriptional regulator, AsnC family.
  
 0.984
AEB84717.1
KEGG: dia:Dtpsy_1716 hypothetical protein.
 
  
 0.982
AEB84716.1
KEGG: ajs:Ajs_1910 cytochrome d1, heme region.
 
  
 0.974
AEB84712.1
Hydroxylamine reductase; KEGG: dia:Dtpsy_1710 cytochrome d1 heme region; PFAM: Cytochrome c, class I.
 
  
 0.966
AEB84718.1
KEGG: dia:Dtpsy_1717 hydroxylamine reductase; PFAM: Cytochrome c, class I.
 
  
 0.957
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.920
hemH-2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.920
AEB84719.1
TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: dia:Dtpsy_1718 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase.
 
  
 0.723
AEB83771.1
Nitrous oxide expression regulator, NosR; KEGG: dia:Dtpsy_1059 FMN-binding domain protein; PFAM: FMN-binding; SMART: FMN-binding.
 
  
 0.714
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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