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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84733.1Hypothetical protein; Manually curated; KEGG: ajs:Ajs_1927 hypothetical protein. (176 aa)    
Predicted Functional Partners:
AEB84734.1
Protein of unknown function DUF2257; KEGG: dia:Dtpsy_1731 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2257.
       0.703
AEB87014.1
SMC domain protein; PFAM: RecF/RecN/SMC; KEGG: dia:Dtpsy_3475 SMC domain protein.
  
     0.644
AEB87013.1
KEGG: ajs:Ajs_4116 hypothetical protein.
  
     0.633
AEB87012.1
KEGG: dia:Dtpsy_3473 hypothetical protein.
  
     0.596
AEB83108.1
TIGRFAM: Conserved hypothetical protein CHP03016, PEP-CTERM; KEGG: rfr:Rfer_0661 hypothetical protein.
  
     0.520
AEB84562.1
KEGG: dia:Dtpsy_2195 hypothetical protein.
  
     0.506
AEB84735.1
PFAM: UspA; KEGG: dia:Dtpsy_1732 UspA domain protein.
       0.482
AEB82641.1
PFAM: Rickettsia 17kDa surface antigen; KEGG: ajs:Ajs_0152 17 kDa surface antigen.
  
     0.464
AEB83495.1
KEGG: rfr:Rfer_0701 hypothetical protein.
  
     0.451
AEB86845.1
Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_3342 sporulation domain protein.
  
     0.445
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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