Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB84769.1PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB. (102 aa)    
Predicted Functional Partners:
AEB84770.1
KEGG: dia:Dtpsy_1648 hypothetical protein.
  
  
 0.873
AEB83623.1
KEGG: ctt:CtCNB1_1949 putative serine protein kinase, PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA.
   
    0.824
AEB86680.1
PFAM: Ferritin/Dps protein; KEGG: dia:Dtpsy_0369 ferritin Dps family protein; Belongs to the Dps family.
  
  
 0.809
AEB83019.1
Transport-associated protein; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; PFAM: Transport-associated; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
   
  
 0.762
AEB84771.1
KEGG: ajs:Ajs_2133 hypothetical protein.
       0.744
AEB84866.1
PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_2324 methyltransferase type 11.
  
    0.725
AEB85761.1
KEGG: dia:Dtpsy_2242 putative metal dependent phosphohydrolase.
 
     0.681
AEB83625.1
SpoVR family protein; PFAM: Sporulation stage V, protein R; KEGG: dac:Daci_2329 SpoVR family protein.
   
  
 0.637
AEB85948.1
KEGG: dia:Dtpsy_2505 hypothetical protein.
  
     0.632
AEB86745.1
PFAM: Protein of unknown function DUF2214, membrane; KEGG: ajs:Ajs_0341 putative transmembrane protein.
  
     0.632
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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