Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB84788.1PFAM: Transposase (putative), IS66 Orf2-like; KEGG: rfr:Rfer_2710 IS66 Orf2 like. (140 aa)    
Predicted Functional Partners:
AEB84789.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.945
AEB82635.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.772
AEB82815.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.772
AEB85403.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.772
AEB85853.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.772
AEB86180.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.772
AEB86287.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
 
   
 0.772
AEB82637.1
PFAM: Transposase IS3/IS911family; KEGG: rfr:Rfer_2709 transposase IS3/IS911.
 
   
 0.572
AEB82813.1
PFAM: Transposase IS3/IS911family; KEGG: rfr:Rfer_2709 transposase IS3/IS911.
 
   
 0.572
AEB83096.1
PFAM: Transposase IS3/IS911family; KEGG: rfr:Rfer_2709 transposase IS3/IS911.
 
   
 0.572
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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