STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB84796.1PFAM: Transglycosylase-associated protein; KEGG: aav:Aave_2831 transglycosylase-associated protein. (83 aa)    
Predicted Functional Partners:
AEB84795.1
Uncharacterized protein family UPF0310; PFAM: Protein of unknown function DUF55; KEGG: aav:Aave_2834 hypothetical protein.
       0.773
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.702
AEB84794.1
Hypothetical protein; KEGG: ade:Adeh_1681 PE-PGRS family protein.
       0.701
AEB85273.1
Methyltransferase; KEGG: dia:Dtpsy_1586 methyltransferase; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260.
   
    0.659
AEB84797.1
KEGG: ajs:Ajs_2091 NLP/P60 protein; manually curated; PFAM: NLP/P60.
  
    0.543
AEB84769.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB.
  
  
 0.511
AEB83398.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_2835 hypothetical protein.
  
  
 0.509
AEB83764.1
PFAM: Uncharacterised protein family, zinc metallopeptidase putative; KEGG: dia:Dtpsy_1052 protein of unknown function zinc metallopeptidase putative.
 
  
 0.486
AEB83019.1
Transport-associated protein; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; PFAM: Transport-associated; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
 
  
 0.453
AEB83427.1
KEGG: dac:Daci_1840 putative lipoprotein.
  
    0.442
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.