Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB84797.1KEGG: ajs:Ajs_2091 NLP/P60 protein; manually curated; PFAM: NLP/P60. (190 aa)    
Predicted Functional Partners:
AEB83404.1
Carboxyl-terminal protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: ajs:Ajs_3506 C-terminal processing peptidase-3; SMART: Peptidase S41; PDZ/DHR/GLGF; Belongs to the peptidase S41A family.
    
 
 0.567
AEB84408.1
TIGRFAM: Tape measure domain; KEGG: dia:Dtpsy_3197 phage tape measure protein.
  
 
 0.547
AEB84796.1
PFAM: Transglycosylase-associated protein; KEGG: aav:Aave_2831 transglycosylase-associated protein.
  
    0.538
AEB86512.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.497
AEB84795.1
Uncharacterized protein family UPF0310; PFAM: Protein of unknown function DUF55; KEGG: aav:Aave_2834 hypothetical protein.
       0.476
AEB84357.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dia:Dtpsy_1397 OmpA/MotB domain protein.
 
 
 0.470
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.456
AEB85506.1
PFAM: Lytic transglycosylase-like, catalytic; MLTD-N; Peptidoglycan-binding lysin domain; KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic.
  
  
 0.452
AEB86881.1
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dia:Dtpsy_3364 OmpA/MotB domain protein.
 
 
 0.434
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.422
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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