Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB84798.1PFAM: Amino acid permease domain; KEGG: dac:Daci_3739 D-alanine/D-serine/glycine permease. (474 aa)    
Predicted Functional Partners:
AEB84799.1
KEGG: dia:Dtpsy_1665 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1.
 
   
 0.662
AEB86349.1
PFAM: SNARE associated Golgi protein; KEGG: dia:Dtpsy_1467 SNARE associated Golgi protein.
  
     0.570
AEB84082.1
PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: ctt:CtCNB1_0166 cytosine/purines/uracil permease; Belongs to the purine-cytosine permease (2.A.39) family.
  
  
 0.517
AEB85467.1
PFAM: Major facilitator superfamily MFS-1; KEGG: hse:Hsero_1116 4-hydroxybenzoate transporter transmembrane protein.
  
   
 0.479
AEB85279.1
Xanthine permease; KEGG: ctt:CtCNB1_3177 uracil-xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease.
  
     0.438
AEB85459.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.422
AEB84797.1
KEGG: ajs:Ajs_2091 NLP/P60 protein; manually curated; PFAM: NLP/P60.
       0.408
AEB83740.1
KEGG: dac:Daci_2107 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease.
  
     0.403
AEB84354.1
Chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; KEGG: dia:Dtpsy_1394 chorismate mutase; SMART: Chorismate mutase.
      
 0.400
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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